A Point Pattern Simulator for Spatial Cellular Data

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Documentation for package ‘scSpatialSIM’ version 0.1.3.4

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

CalculateDensity	Compute Simulation Heatmaps
CreateSimulationObject	Create a spatial simulation object.
CreateSpatialList	Get Spatial Files from a 'SpatSimObj'
ExtractParameters	Get Simulation Parameters
GenerateCellPositivity	Generate Cell Positivity
GenerateDistributions	Generate Characteristic Distributions of Cells
GenerateHoles	Generate holes in a spatial simulation object
GenerateSpatialPattern	Generate Spatial Point Pattern
GenerateTissue	Generate Tissue
plot.SpatSimObj	plot function for SpatSimObj
PlotSimulation	Plot Simulation
SummariseSpatial	Summarise Spatial
summary.SpatSimObj	summary function for SpatSimObj
UpdateSimulationWindow	Update the simulation window in a SpatSimObj
wm	Round spatstat window