Last updated on 2025-07-04 19:50:23 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 13.96 | 194.30 | 208.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.18 | 243.84 | 254.02 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 392.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 183.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 176.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 20.00 | 226.00 | 246.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.048, elapsed: 1.859 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.080, system: 0.123, elapsed: 12.093 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.015, elapsed: 0.225 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.781, system: 0.212, elapsed: 5.328 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.212 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.258, system: 0.425, elapsed: 20.477 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.553, system: 0.039, elapsed: 2.529 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.979, system: 0.073, elapsed: 12.712 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.352 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.785, system: 0.176, elapsed: 7.270 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.260 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.210, system: 0.327, elapsed: 23.990 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.034, elapsed: 2.965 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.083, system: 0.081, elapsed: 16.610 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.643, system: 0.193, elapsed: 5.558 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.293 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.164, system: 0.221, elapsed: 1.329 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.441, system: 0.571, elapsed: 28.138 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.530, system: 0.033, elapsed: 2.686 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.033, system: 0.077, elapsed: 14.368 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.013, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.786, system: 0.195, elapsed: 5.891 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.249 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.275, system: 0.499, elapsed: 17.193 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.624, system: 0.857, elapsed: 41.803 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.046, elapsed: 1.676 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.898, system: 0.073, elapsed: 9.632 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.013, elapsed: 0.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.470, system: 0.182, elapsed: 4.299 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.004, elapsed: 0.185 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.730, system: 0.341, elapsed: 16.682 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.575, system: 0.037, elapsed: 2.466 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.219, system: 0.102, elapsed: 15.297 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.365 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.627, system: 0.184, elapsed: 6.807 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.285 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.296, system: 0.361, elapsed: 26.217 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.647, system: 0.041, elapsed: 3.092 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.170, system: 0.078, elapsed: 13.787 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.545, system: 0.173, elapsed: 6.591 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.426 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.073, system: 0.245, elapsed: 1.672 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.402, system: 0.575, elapsed: 27.065 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.031, elapsed: 3.610 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.157, system: 0.071, elapsed: 19.570 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.366 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.578, system: 0.177, elapsed: 5.363 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.008, elapsed: 0.248 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.063, system: 0.475, elapsed: 15.791 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.278, system: 0.805, elapsed: 46.159 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64